PADA1 predicts the DNA-binding regions of resolved protein structures – Serrano's lab
Prediction of DNA-protein binding interactions with TASSER models. (A)... | Download Scientific Diagram
Predicting Target DNA Sequences of DNA-Binding Proteins Based on Unbound Structures | PLOS ONE
DNA-binding residues and binding mode prediction with binding-mechanism concerned models | BMC Genomics | Full Text
Improving DNA-Binding Protein Prediction Using Three-Part Sequence-Order Feature Extraction and a Deep Neural Network Algorithm | Journal of Chemical Information and Modeling
The process of DNA-binding protein prediction. | Download Scientific Diagram
IJMS | Free Full-Text | PSFM-DBT: Identifying DNA-Binding Proteins by Combing Position Specific Frequency Matrix and Distance-Bigram Transformation
Predicting transcription factor binding sites using DNA shape features based on shared hybrid deep learning architecture: Molecular Therapy - Nucleic Acids
Predicting Hot Spot Residues at Protein–DNA Binding Interfaces Based on Sequence Information | Interdisciplinary Sciences: Computational Life Sciences
Helix-turn-helix - Wikipedia
DNA-binding protein - Wikipedia
PDRLGB: precise DNA-binding residue prediction using a light gradient boosting machine | BMC Bioinformatics | Full Text
iDRBP_MMC: Identifying DNA-Binding Proteins and RNA-Binding Proteins Based on Multi-Label Learning Model and Motif-Based Convolutional Neural Network - ScienceDirect
Examples of DNA-binding protein prediction on APO104. (A–D) In each... | Download Scientific Diagram
dSPRINT: Machine learning for uncovering protein-ligand interaction sites - Princeton Insights
Frontiers | Prediction of DNA-Binding Protein–Drug-Binding Sites Using Residue Interaction Networks and Sequence Feature
Protein–DNA/RNA Interactions: An Overview of Investigation Methods in the -Omics Era | Journal of Proteome Research
AlphaFold2-aware protein-DNA binding site prediction using graph transformer | bioRxiv
PreDBA: A heterogeneous ensemble approach for predicting protein-DNA binding affinity | Scientific Reports
Local DNA shape is a general principle of transcription factor binding specificity in Arabidopsis thaliana | Nature Communications
Predicting the DNA Binding Site Motifs of Novel Transcription Factors... | Download Scientific Diagram
MsDBP: Exploring DNA-Binding Proteins by Integrating Multiscale Sequence Information via Chou's Five-Step Rule | Journal of Proteome Research
Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning | Nature Biotechnology
Accurate prediction of nucleic acid and protein-nucleic acid complexes using RoseTTAFoldNA | bioRxiv
